STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_1656PFAM: ribulose bisphosphate carboxylase small chain; KEGG: bbt:BBta_0452 ribulose 1,5-bisphosphate carboxylase small subunit. (141 aa)    
Predicted Functional Partners:
Tcur_1655
PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit- like; KEGG: rpt:Rpal_1747 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
 
 0.999
Tcur_1650
PFAM: phosphoribulokinase/uridine kinase; KEGG: phosphoribulokinase; K00855 phosphoribulokinase.
 
  
 0.970
Tcur_1679
Carbonate dehydratase; PFAM: carbonic anhydrase; sulphate transporter; Xanthine/uracil/vitamin C permease; KEGG: mxa:MXAN_4784 sulfate permease family inorganic anion transporter.
    
 
 0.928
Tcur_1657
CbbX protein; KEGG: reh:H16_B1393 rubisco accessory protein CbbX, AAA ATPase; TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
  
 0.926
pgk
PFAM: phosphoglycerate kinase; KEGG: phosphoglycerate kinase; K00927 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.917
Tcur_0817
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_2037 HAD family hydrolase.
    
 0.913
Tcur_0948
KEGG: ade:Adeh_0672 haloacid dehalogenase-like hydrolase.
    
 0.913
Tcur_4015
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ank:AnaeK_0706 haloacid dehalogenase domain protein hydrolase.
    
 0.913
Tcur_0585
KEGG: pfo:Pfl01_1011 hexapaptide repeat-containing transferase.
   
 
 0.878
Tcur_1654
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsq:Rsph17025_4062 hypothetical protein.
 
   
 0.799
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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