STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2126Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ret:RHE_CH00250 LacI family transcription regulator. (284 aa)    
Predicted Functional Partners:
Tcur_4695
PFAM: protein of unknown function DUF397.
 
   
 0.783
Tcur_0876
PFAM: protein of unknown function DUF397.
 
   
 0.782
Tcur_1969
PFAM: protein of unknown function DUF397.
 
   
 0.782
Tcur_2127
PFAM: protein of unknown function DUF397.
       0.775
Tcur_0716
PFAM: protein of unknown function DUF397.
  
     0.771
Tcur_3763
PFAM: protein of unknown function DUF397.
 
     0.763
Tcur_1462
PFAM: protein of unknown function DUF574; KEGG: scl:sce6070 hypothetical protein.
  
     0.762
Tcur_1954
PFAM: protein of unknown function DUF574; KEGG: scl:sce6070 hypothetical protein.
  
     0.762
Tcur_1169
PFAM: protein of unknown function DUF574; KEGG: scl:sce6070 hypothetical protein.
  
     0.761
Tcur_4667
PFAM: protein of unknown function DUF574; KEGG: scl:sce6070 hypothetical protein.
  
     0.761
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.