STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2173KEGG: azo:azo3026 hypothetical protein. (317 aa)    
Predicted Functional Partners:
Tcur_2172
PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: sit:TM1040_1966 thiamine pyrophosphokinase.
 
  
 0.988
Tcur_2174
KEGG: reh:H16_B0055 glycine-rich protein.
 
     0.954
Tcur_2175
PFAM: virulence factor MVIN family protein; KEGG: acp:A2cp1_1575 integral membrane protein MviN.
 
     0.925
Tcur_2176
PFAM: glycosyl transferase group 1; KEGG: scl:sce4241 glycosyltransferase.
 
     0.842
Tcur_0118
KEGG: ank:AnaeK_2947 hypothetical protein.
 
     0.804
Tcur_2315
Hypothetical protein; KEGG: bac:BamMC406_4114 undecaprenyl-phosphate glucose phosphotransferase.
 
     0.791
Tcur_0116
PFAM: glycosyl transferase family 2; KEGG: rsp:RSP_2150 glycosyl transferase.
 
     0.764
Tcur_0584
KEGG: hypothetical protein.
  
     0.642
Tcur_2103
Hypothetical protein.
  
     0.566
Tcur_1570
Hypothetical protein.
  
     0.549
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.