STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2176PFAM: glycosyl transferase group 1; KEGG: scl:sce4241 glycosyltransferase. (381 aa)    
Predicted Functional Partners:
Tcur_2175
PFAM: virulence factor MVIN family protein; KEGG: acp:A2cp1_1575 integral membrane protein MviN.
   
 0.952
Tcur_2174
KEGG: reh:H16_B0055 glycine-rich protein.
 
  
 0.898
Tcur_2173
KEGG: azo:azo3026 hypothetical protein.
 
     0.842
Tcur_2172
PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: sit:TM1040_1966 thiamine pyrophosphokinase.
 
     0.821
Tcur_0118
KEGG: ank:AnaeK_2947 hypothetical protein.
 
   
 0.712
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.653
Tcur_2315
Hypothetical protein; KEGG: bac:BamMC406_4114 undecaprenyl-phosphate glucose phosphotransferase.
  
     0.641
Tcur_0280
PFAM: glycoside hydrolase family 13 domain protein; KEGG: dde:Dde_2682 isoamylase protein-like.
   
 0.617
Tcur_1001
KEGG: ank:AnaeK_1404 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.613
Tcur_0116
PFAM: glycosyl transferase family 2; KEGG: rsp:RSP_2150 glycosyl transferase.
 
 
 0.588
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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