STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2256Putative signal transduction protein with EFhand domain; PFAM: Calcium-binding EF-hand-containing protein; SMART: Calcium-binding EF-hand-containing protein; KEGG: stnnc; slow-specific troponin C; K05865 troponin C, slow skeletal and cardiac muscles. (82 aa)    
Predicted Functional Partners:
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
 
 0.769
Tcur_4761
Hypothetical protein; KEGG: GK16139 gene product from transcript GK16139- RA.
  
     0.767
Tcur_2257
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: azo:azo1364 cyclic AMP receptor protein.
   
 
 0.739
Tcur_1215
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: similar to predicted protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.734
Tcur_4697
KEGG: hypothetical protein LOC100123740.
  
     0.658
Tcur_2016
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_2919 Fe-S oxidoreductases.
  
     0.650
Tcur_0868
Hypothetical protein; KEGG: nha:Nham_3622 OmpA/MotB.
  
     0.640
Tcur_2545
PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: sfu:Sfum_3846 helicase domain protein.
   
 0.628
Tcur_0246
Hypothetical protein; KEGG: guanylate kinase; K00942 guanylate kinase.
    
 0.616
Tcur_2069
PFAM: Urea transporter; KEGG: har:HEAR1518 putative UreA transporter.
  
     0.616
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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