STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2452KEGG: mxa:MXAN_6210 hypothetical protein. (384 aa)    
Predicted Functional Partners:
Tcur_2450
SMART: zinc finger CDGSH-type domain protein; KEGG: rme:Rmet_4406 zinc finger, CDGSH-type.
       0.639
Tcur_2451
TIGRFAM: methylase; PFAM: methyltransferase small; KEGG: ppd:Ppro_3005 HemK family modification methylase.
       0.639
Tcur_1468
Transcriptional regulator, winged helix family; PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: scl:sce5225 protein kinase.
  
     0.581
Tcur_0262
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: ade:Adeh_3124 RNA polymerase factor sigma-70; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.516
Tcur_2453
PFAM: beta-lactamase domain protein; KEGG: scl:sce6016 hypothetical protein.
       0.486
Tcur_2454
TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: oca:OCAR_6856 alcohol dehydrogenase class 3.
       0.486
Tcur_3986
PFAM: bifunctional deaminase-reductase domain protein; KEGG: afw:Anae109_3251 deaminase-reductase domain- containing protein.
 
  
 0.473
Tcur_1363
KEGG: mlo:mlr3943 hypothetical protein.
  
     0.437
Tcur_0324
PFAM: NmrA family protein; KEGG: scl:sce8968 nucleotide-diphosphate-sugar epimerase.
  
     0.416
Tcur_1516
PFAM: Tetratricopeptide TPR_4; KEGG: scl:sce5225 protein kinase.
  
     0.416
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.