STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2604SMART: regulatory protein ArsR; KEGG: sme:SM_b21576 ArsR family regulatory protein. (328 aa)    
Predicted Functional Partners:
Tcur_2605
PFAM: major facilitator superfamily MFS_1; KEGG: xom:XOO_2526 drug:proton antiporter.
 
   
 0.801
Tcur_3685
PFAM: protein of unknown function DUF1470; KEGG: pfs:PFLU2974 hypothetical protein.
  
   
 0.598
Tcur_2606
Hypothetical protein.
       0.558
Tcur_4472
KEGG: pen:PSEEN2637 hypothetical protein.
  
     0.499
Tcur_0721
PFAM: regulatory protein TetR; KEGG: bbt:BBta_0873 TetR family transcriptional regulator.
  
     0.480
Tcur_1784
Hypothetical protein.
  
     0.449
Tcur_0424
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ppd:Ppro_1907 XRE family transcriptional regulator.
  
    0.409
Tcur_2864
Putative transcriptional regulator, PucR family; KEGG: bam:Bamb_4325 hypothetical protein.
  
    0.406
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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