STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_2702PFAM: AMP-dependent synthetase and ligase; KEGG: ccs:CCNA_01017 acyl-CoA synthetase. (521 aa)    
Predicted Functional Partners:
Tcur_2707
PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_5158 AMP-dependent synthetase and ligase.
 
  
 
0.854
Tcur_3564
PFAM: lipase class 2; KEGG: abo:ABO_2664 hypothetical protein.
     
  0.800
Tcur_2701
PFAM: Luciferase-like monooxygenase; KEGG: rpi:Rpic_0157 luciferase-like monooxygenase.
       0.775
Tcur_2703
PFAM: Luciferase-like monooxygenase; KEGG: xau:Xaut_3263 luciferase family protein.
       0.775
Tcur_2704
PFAM: Luciferase-like monooxygenase; KEGG: tgr:Tgr7_0734 luciferase-like monooxygenase.
      0.775
Tcur_1885
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce2387 non-ribosomal peptide synthetase.
 
0.758
Tcur_1886
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: scl:sce8257 non-ribosomal peptide synthetase.
  
 
0.758
Tcur_1887
TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: avi:Avi_9643 peptide synthetase.
  
 
0.758
Tcur_2088
PFAM: AMP-dependent synthetase and ligase; glycosyl transferase family 2; KEGG: dar:Daro_2822 AMP-dependent synthetase and ligase.
  
  
 
0.718
Tcur_3984
PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_0848 AMP-dependent synthetase and ligase.
  
  
 
0.713
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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