STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3151PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mca:MCA1018 ErfK/YbiS/YcfS/YnhG family protein. (431 aa)    
Predicted Functional Partners:
Tcur_3565
PFAM: Methionine synthase vitamin-B12 independent; KEGG: dal:Dalk_5194 hypothetical protein.
  
     0.713
Tcur_4846
PFAM: Colicin V production protein; peptidase S1 and S6 chymotrypsin/Hap; KEGG: scl:sce4154 serine protease.
 
     0.699
Tcur_3150
Hypothetical protein.
       0.554
Tcur_3914
KEGG: aeh:Mlg_0482 SSU ribosomal protein S4P.
  
     0.478
Tcur_3874
Hypothetical protein.
 
     0.462
Tcur_0603
Hypothetical protein.
  
     0.454
Tcur_1647
KEGG: ccs:CCNA_02657 hypothetical protein.
  
     0.439
Tcur_1037
PFAM: Septum formation initiator.
 
     0.430
Tcur_2941
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: kpe:KPK_3611 SmtA protein.
  
     0.418
Tcur_0636
Glycosyltransferase-like protein; KEGG: sew:SeSA_A0881 putative glycosyltransferase, cell wall biogenesis.
  
     0.417
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.