STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3335KEGG: eba:ebA6069 hypothetical protein. (169 aa)    
Predicted Functional Partners:
Tcur_3334
Hypothetical protein; KEGG: FAP92; flagellar associated protein.
 
    0.882
Tcur_0061
Hypothetical protein.
  
     0.615
rimP
Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.613
Tcur_3244
Hypothetical protein.
  
     0.555
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
       0.543
Tcur_4018
KEGG: dar:Daro_1500 hypothetical protein.
  
     0.529
Tcur_4138
PFAM: TadE family protein; KEGG: rpi:Rpic_4246 TadE family protein.
  
     0.511
Tcur_1177
Hypothetical protein; KEGG: dvl:Dvul_2879 NAD-dependent epimerase/dehydratase.
  
     0.496
Tcur_4136
PFAM: TadE family protein; KEGG: dvl:Dvul_1104 von Willebrand factor, type A.
  
     0.488
Tcur_4141
PFAM: type II secretion system protein; KEGG: csa:Csal_1660 type II secretion system protein.
  
     0.482
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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