STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3514PFAM: Luciferase-like monooxygenase; KEGG: rpb:RPB_4411 luciferase-like. (295 aa)    
Predicted Functional Partners:
Tcur_3516
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_B0654 biphenyl-2,3-diol 1,2- dioxygenase.
  
    0.776
Tcur_3513
KEGG: reh:H16_B0647 hypothetical protein.
       0.773
Tcur_3515
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B1518 hypothetical protein.
       0.773
Tcur_3512
PFAM: AMP-dependent synthetase and ligase; KEGG: dol:Dole_0112 AMP-dependent synthetase and ligase.
 
     0.749
Tcur_3123
PFAM: Luciferase-like monooxygenase; KEGG: pna:Pnap_0547 luciferase family protein.
  
     0.741
Tcur_4157
KEGG: oca:OCAR_4999 hypothetical protein.
  
     0.589
Tcur_2945
PFAM: Luciferase-like monooxygenase; KEGG: pzu:PHZ_c2543 5,10- methylenetetrahydromethanopterin reductase.
  
     0.576
Tcur_4073
TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; nitroreductase; KEGG: pzu:PHZ_c2547 hypothetical protein.
 
  
 0.547
Tcur_0467
PFAM: Luciferase-like monooxygenase; KEGG: avn:Avin_30500 alkanesulfonate monooxygenase.
  
     0.544
Tcur_3517
Hypothetical protein.
       0.531
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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