STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_3704KEGG: ank:AnaeK_1178 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region. (430 aa)    
Predicted Functional Partners:
Tcur_3705
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gsu:GSU1007 GAF domain/HD domain-containing protein.
 
    
0.866
Tcur_4451
Hypothetical protein.
  
 
   0.731
Tcur_0226
PFAM: protein of unknown function DUF88; KEGG: Hypothetical protein CBG04553.
  
     0.678
Tcur_3555
KEGG: dvm:DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
 
 
 0.669
Tcur_0429
Putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein.
 
     0.638
Tcur_3731
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: dal:Dalk_1637 NAD-dependent epimerase/dehydratase.
  
     0.624
Tcur_1598
Hypothetical protein.
  
     0.588
Tcur_4966
Hypothetical protein.
  
    0.584
Tcur_0838
Putative PAS/PAC sensor protein; KEGG: gme:Gmet_1230 serine phosphatase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; PAS domain containing protein.
 
   
 0.582
Tcur_3707
TIGRFAM: anti-sigma factor; KEGG: aeh:Mlg_1635 putative transmembrane anti- sigma factor.
 
     0.564
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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