STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4092PFAM: glycosyl transferase group 1; KEGG: mpt:Mpe_A0723 glycosyltransferase-like protein. (359 aa)    
Predicted Functional Partners:
Tcur_4093
PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_0146 glycosyl transferase, family 2.
 
 
 0.932
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.653
Tcur_4094
KEGG: lch:Lcho_4248 hypothetical protein.
     
 0.636
Tcur_0280
PFAM: glycoside hydrolase family 13 domain protein; KEGG: dde:Dde_2682 isoamylase protein-like.
   
 0.617
Tcur_4083
KEGG: scl:sce8020 hypothetical protein.
 
  
 0.555
Tcur_1001
KEGG: ank:AnaeK_1404 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.554
Tcur_1345
PFAM: NERD domain protein; KEGG: mpt:Mpe_A3609 hypothetical protein.
  
     0.552
Tcur_2437
PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: gbm:Gbem_3402 nucleotidyl transferase.
  
 
 0.486
Tcur_4090
KEGG: rpi:Rpic_2728 alpha/beta hydrolase.
       0.465
Tcur_4091
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: bav:BAV1607 phage excisionase.
       0.465
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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