STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4477PFAM: RDD domain containing protein; KEGG: mxa:MXAN_1810 RDD family protein. (174 aa)    
Predicted Functional Partners:
Tcur_4478
PFAM: RDD domain containing protein; KEGG: xac:XAC3806 hypothetical protein.
 
    
0.827
Tcur_4479
PFAM: GCN5-related N-acetyltransferase; KEGG: gur:Gura_1708 acetyltransferase; Belongs to the acetyltransferase family.
       0.773
Tcur_4451
Hypothetical protein.
 
     0.693
Tcur_3670
Hypothetical protein; KEGG: GF17743 gene product from transcript GF17743- RA.
  
     0.685
Tcur_4940
Hypothetical protein.
  
     0.658
Tcur_4286
Hypothetical protein; KEGG: Col7a1; procollagen, type VII, alpha 1.
  
     0.629
Tcur_2955
KEGG: hypothetical protein.
  
     0.563
Tcur_3050
PFAM: metallophosphoesterase; KEGG: sit:TM1040_3062 metallophosphoesterase.
  
     0.540
Tcur_4436
PFAM: Bifunctional DNA primase/polymerase; KEGG: dol:Dole_2704 bifunctional DNA primase/polymerase.
  
     0.534
Tcur_4827
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
  
     0.493
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.