STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4643PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (273 aa)    
Predicted Functional Partners:
Tcur_0373
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.760
Tcur_4780
Hypothetical protein.
  
     0.756
Tcur_2659
SMART: helix-turn-helix domain protein.
  
     0.754
Tcur_0163
Hypothetical protein; KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein.
  
     0.752
Tcur_1414
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: hypothetical protein; K03627 putative transcription factor.
  
     0.752
Tcur_1970
SMART: helix-turn-helix domain protein.
  
     0.751
Tcur_0030
SMART: helix-turn-helix domain protein.
  
     0.750
Tcur_4695
PFAM: protein of unknown function DUF397.
  
     0.740
Tcur_3069
PFAM: protein of unknown function DUF901; KEGG: SNF2 superfamily protein.
  
     0.706
Tcur_4578
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.705
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.