STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4697KEGG: hypothetical protein LOC100123740. (251 aa)    
Predicted Functional Partners:
Tcur_4761
Hypothetical protein; KEGG: GK16139 gene product from transcript GK16139- RA.
  
     0.733
Tcur_2256
Putative signal transduction protein with EFhand domain; PFAM: Calcium-binding EF-hand-containing protein; SMART: Calcium-binding EF-hand-containing protein; KEGG: stnnc; slow-specific troponin C; K05865 troponin C, slow skeletal and cardiac muscles.
  
     0.658
Tcur_4698
KEGG: eba:ebA459 hypothetical protein.
       0.580
Tcur_1264
KEGG: similar to hedgehog protein.
  
     0.524
Tcur_3344
Hypothetical protein; KEGG: similar to gamma-aminobutyric acid A receptor, epsilon.
  
     0.503
Tcur_4696
PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.503
Tcur_0868
Hypothetical protein; KEGG: nha:Nham_3622 OmpA/MotB.
  
     0.482
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
  
     0.455
Tcur_0291
Hypothetical protein; KEGG: similar to mucin.
  
     0.445
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.