STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4773Beta-galactosidase; KEGG: hch:HCH_06907 beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1. (447 aa)    
Predicted Functional Partners:
Tcur_3858
PFAM: glycoside hydrolase family 4; KEGG: ypb:YPTS_3929 glycoside hydrolase family protein.
 
 
 0.928
Tcur_1739
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: avn:Avin_51470 alpha-glucosidase.
 
 
 0.920
Tcur_1738
PFAM: glycoside hydrolase family 6; KEGG: mxa:MXAN_4837 endoglucanase; Belongs to the glycosyl hydrolase family 6.
    
 0.910
Tcur_2184
Beta-galactosidase; KEGG: scl:sce4297 Beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
  
  
 
0.905
Tcur_1733
Beta-galactosidase; KEGG: mxa:MXAN_6555 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
  
  
 
0.904
Tcur_2446
PFAM: PfkB domain protein; KEGG: bbt:BBta_6479 6-phosphofructokinase.
  
  
 0.709
Tcur_4772
PFAM: regulatory protein TetR; KEGG: scl:sce5559 HTH-type transcriptional regulator BetI.
       0.517
Tcur_1356
TIGRFAM: ribose 5-phosphate isomerase; sugar- phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: mca:MCA0043 ribose 5-phosphate isomerase B.
  
  
 0.465
Tcur_2130
KEGG: hypothetical protein.
    
 0.438
Tcur_2380
Hypothetical protein; KEGG: similar to gametogenetin.
    
 0.438
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.