STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tcur_4935PFAM: membrane-flanked domain; KEGG: kpe:KPK_2129 hypothetical protein. (174 aa)    
Predicted Functional Partners:
Tcur_3068
KEGG: nmu:Nmul_A2002 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: Exonuclease; Excinuclease ABC C subunit domain protein.
 
     0.699
Tcur_3184
Hypothetical protein.
  
     0.682
Tcur_1685
PFAM: membrane-flanked domain; KEGG: xcv:XCV3917 hypothetical protein.
 
  
 0.599
Tcur_1100
SMART: AAA ATPase; KEGG: rsq:Rsph17025_4376 type IV secretion/conjugal transfer ATPase.
 
     0.588
Tcur_1700
KEGG: pat:Patl_3588 hypothetical protein.
  
     0.565
Tcur_0901
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mxa:MXAN_0560 penicillin-resistant dd- carboxypeptidase.
 
     0.553
Tcur_4212
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: dps:DP2570 hypothetical protein.
  
     0.536
Tcur_2244
PFAM: sulfotransferase; KEGG: similar to Dermatan-sulfate epimerase-like protein.
 
     0.517
Tcur_0226
PFAM: protein of unknown function DUF88; KEGG: Hypothetical protein CBG04553.
  
     0.513
Tcur_1345
PFAM: NERD domain protein; KEGG: mpt:Mpe_A3609 hypothetical protein.
  
     0.493
Your Current Organism:
Thermomonospora curvata
NCBI taxonomy Id: 471852
Other names: T. curvata DSM 43183, Thermomonospora curvata DSM 43183, Thermomonospora curvata IFO 15933, Thermomonospora curvata JCM 3096, Thermomonospora curvata NBRC 15933, Thermomonospora curvata str. DSM 43183, Thermomonospora curvata strain DSM 43183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.