Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcav_0026 | Bcav_0027 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain. | 0.915 |
Bcav_0026 | Bcav_0028 | PFAM: Protein kinase domain; PASTA domain. | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain. | 0.889 |
Bcav_0026 | Bcav_0029 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Cell cycle protein; Belongs to the SEDS family. | 0.919 |
Bcav_0026 | Bcav_0030 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein phosphatase 2C. | 0.990 |
Bcav_0026 | Bcav_0031 | PFAM: Protein kinase domain; PASTA domain. | PFAM: FHA domain. | 0.991 |
Bcav_0026 | Bcav_0032 | PFAM: Protein kinase domain; PASTA domain. | PFAM: FHA domain. | 0.989 |
Bcav_0026 | Bcav_0797 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain. | 0.665 |
Bcav_0026 | Bcav_1908 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain; PASTA domain. | 0.577 |
Bcav_0026 | Bcav_2211 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain. | 0.643 |
Bcav_0027 | Bcav_0026 | PFAM: Protein kinase domain. | PFAM: Protein kinase domain; PASTA domain. | 0.915 |
Bcav_0027 | Bcav_0028 | PFAM: Protein kinase domain. | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain. | 0.844 |
Bcav_0027 | Bcav_0029 | PFAM: Protein kinase domain. | PFAM: Cell cycle protein; Belongs to the SEDS family. | 0.880 |
Bcav_0027 | Bcav_0030 | PFAM: Protein kinase domain. | PFAM: Protein phosphatase 2C. | 0.973 |
Bcav_0027 | Bcav_0031 | PFAM: Protein kinase domain. | PFAM: FHA domain. | 0.942 |
Bcav_0027 | Bcav_0032 | PFAM: Protein kinase domain. | PFAM: FHA domain. | 0.914 |
Bcav_0027 | Bcav_1908 | PFAM: Protein kinase domain. | PFAM: Protein kinase domain; PASTA domain. | 0.619 |
Bcav_0028 | Bcav_0026 | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain. | PFAM: Protein kinase domain; PASTA domain. | 0.889 |
Bcav_0028 | Bcav_0027 | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain. | PFAM: Protein kinase domain. | 0.844 |
Bcav_0028 | Bcav_0029 | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain. | PFAM: Cell cycle protein; Belongs to the SEDS family. | 0.998 |
Bcav_0028 | Bcav_0030 | Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain. | PFAM: Protein phosphatase 2C. | 0.897 |
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