Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcav_1648 | Bcav_1649 | Hypothetical protein. | Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase. | 0.773 |
Bcav_1648 | Bcav_1650 | Hypothetical protein. | PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | 0.678 |
Bcav_1648 | Bcav_1651 | Hypothetical protein. | PFAM: LysE type translocator; TIGRFAM: L-lysine exporter. | 0.502 |
Bcav_1649 | Bcav_1648 | Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase. | Hypothetical protein. | 0.773 |
Bcav_1649 | Bcav_1650 | Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase. | PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | 0.678 |
Bcav_1649 | Bcav_1651 | Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase. | PFAM: LysE type translocator; TIGRFAM: L-lysine exporter. | 0.516 |
Bcav_1650 | Bcav_1648 | PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | Hypothetical protein. | 0.678 |
Bcav_1650 | Bcav_1649 | PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase. | 0.678 |
Bcav_1650 | Bcav_1651 | PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | PFAM: LysE type translocator; TIGRFAM: L-lysine exporter. | 0.965 |
Bcav_1651 | Bcav_1648 | PFAM: LysE type translocator; TIGRFAM: L-lysine exporter. | Hypothetical protein. | 0.502 |
Bcav_1651 | Bcav_1649 | PFAM: LysE type translocator; TIGRFAM: L-lysine exporter. | Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase. | 0.516 |
Bcav_1651 | Bcav_1650 | PFAM: LysE type translocator; TIGRFAM: L-lysine exporter. | PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family. | 0.965 |