Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcav_0053 | Bcav_0130 | Putative alpha-galactosidase. | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | 0.915 |
Bcav_0053 | Bcav_0943 | Putative alpha-galactosidase. | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | 0.904 |
Bcav_0053 | Bcav_1278 | Putative alpha-galactosidase. | PFAM: Aldose 1-epimerase. | 0.901 |
Bcav_0053 | Bcav_1316 | Putative alpha-galactosidase. | PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain. | 0.668 |
Bcav_0053 | Bcav_3076 | Putative alpha-galactosidase. | PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain; Beta-galactosidase. | 0.668 |
Bcav_0053 | Bcav_3298 | Putative alpha-galactosidase. | PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain. | 0.668 |
Bcav_0053 | Bcav_3322 | Putative alpha-galactosidase. | PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain. | 0.715 |
Bcav_0053 | Bcav_3379 | Putative alpha-galactosidase. | PFAM: Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain. | 0.925 |
Bcav_0053 | Bcav_3398 | Putative alpha-galactosidase. | Glycoside hydrolase family 35; PFAM: Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family. | 0.710 |
Bcav_0130 | Bcav_0053 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | Putative alpha-galactosidase. | 0.915 |
Bcav_0130 | Bcav_0943 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | 0.929 |
Bcav_0130 | Bcav_1278 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | PFAM: Aldose 1-epimerase. | 0.906 |
Bcav_0130 | Bcav_1316 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain. | 0.800 |
Bcav_0130 | Bcav_3076 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain; Beta-galactosidase. | 0.790 |
Bcav_0130 | Bcav_3298 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain. | 0.795 |
Bcav_0130 | Bcav_3322 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | PFAM: Beta-galactosidase; Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain. | 0.804 |
Bcav_0130 | Bcav_3379 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | PFAM: Glycosyl hydrolases family 2, sugar binding domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain. | 0.962 |
Bcav_0130 | Bcav_3398 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | Glycoside hydrolase family 35; PFAM: Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family. | 0.732 |
Bcav_0943 | Bcav_0053 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | Putative alpha-galactosidase. | 0.904 |
Bcav_0943 | Bcav_0130 | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | Glycoside hydrolase clan GH-D; PFAM: Melibiase. | 0.929 |
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