Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bcav_1209 | dcd | Bcav_1209 | Bcav_3823 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.624 |
Bcav_3822 | Bcav_3824 | Bcav_3822 | Bcav_3824 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3822 | Bcav_3825 | Bcav_3822 | Bcav_3825 | Hypothetical protein. | Protein of unknown function DUF161; PFAM: Uncharacterized BCR, YitT family COG1284. | 0.773 |
Bcav_3822 | Bcav_3826 | Bcav_3822 | Bcav_3826 | Hypothetical protein. | PFAM: Phosphotransferase enzyme family; TIGRFAM: conserved hypothetical protein TIGR02569, Actinobacterial. | 0.661 |
Bcav_3822 | Bcav_3827 | Bcav_3822 | Bcav_3827 | Hypothetical protein. | Conserved hypothetical protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026. | 0.661 |
Bcav_3822 | dcd | Bcav_3822 | Bcav_3823 | Hypothetical protein. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.816 |
Bcav_3824 | Bcav_3822 | Bcav_3824 | Bcav_3822 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Bcav_3824 | Bcav_3825 | Bcav_3824 | Bcav_3825 | Hypothetical protein. | Protein of unknown function DUF161; PFAM: Uncharacterized BCR, YitT family COG1284. | 0.773 |
Bcav_3824 | Bcav_3826 | Bcav_3824 | Bcav_3826 | Hypothetical protein. | PFAM: Phosphotransferase enzyme family; TIGRFAM: conserved hypothetical protein TIGR02569, Actinobacterial. | 0.661 |
Bcav_3824 | Bcav_3827 | Bcav_3824 | Bcav_3827 | Hypothetical protein. | Conserved hypothetical protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026. | 0.666 |
Bcav_3824 | dcd | Bcav_3824 | Bcav_3823 | Hypothetical protein. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.776 |
Bcav_3825 | Bcav_3822 | Bcav_3825 | Bcav_3822 | Protein of unknown function DUF161; PFAM: Uncharacterized BCR, YitT family COG1284. | Hypothetical protein. | 0.773 |
Bcav_3825 | Bcav_3824 | Bcav_3825 | Bcav_3824 | Protein of unknown function DUF161; PFAM: Uncharacterized BCR, YitT family COG1284. | Hypothetical protein. | 0.773 |
Bcav_3825 | Bcav_3826 | Bcav_3825 | Bcav_3826 | Protein of unknown function DUF161; PFAM: Uncharacterized BCR, YitT family COG1284. | PFAM: Phosphotransferase enzyme family; TIGRFAM: conserved hypothetical protein TIGR02569, Actinobacterial. | 0.661 |
Bcav_3825 | Bcav_3827 | Bcav_3825 | Bcav_3827 | Protein of unknown function DUF161; PFAM: Uncharacterized BCR, YitT family COG1284. | Conserved hypothetical protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026. | 0.661 |
Bcav_3825 | dcd | Bcav_3825 | Bcav_3823 | Protein of unknown function DUF161; PFAM: Uncharacterized BCR, YitT family COG1284. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.776 |
Bcav_3826 | Bcav_3822 | Bcav_3826 | Bcav_3822 | PFAM: Phosphotransferase enzyme family; TIGRFAM: conserved hypothetical protein TIGR02569, Actinobacterial. | Hypothetical protein. | 0.661 |
Bcav_3826 | Bcav_3824 | Bcav_3826 | Bcav_3824 | PFAM: Phosphotransferase enzyme family; TIGRFAM: conserved hypothetical protein TIGR02569, Actinobacterial. | Hypothetical protein. | 0.661 |
Bcav_3826 | Bcav_3825 | Bcav_3826 | Bcav_3825 | PFAM: Phosphotransferase enzyme family; TIGRFAM: conserved hypothetical protein TIGR02569, Actinobacterial. | Protein of unknown function DUF161; PFAM: Uncharacterized BCR, YitT family COG1284. | 0.661 |
Bcav_3826 | Bcav_3827 | Bcav_3826 | Bcav_3827 | PFAM: Phosphotransferase enzyme family; TIGRFAM: conserved hypothetical protein TIGR02569, Actinobacterial. | Conserved hypothetical protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026. | 0.773 |
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