Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcav_0026 | Bcav_0027 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain. | 0.915 |
Bcav_0026 | Bcav_0797 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain. | 0.665 |
Bcav_0026 | Bcav_1757 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain. | 0.642 |
Bcav_0026 | Bcav_1860 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain. | 0.433 |
Bcav_0026 | Bcav_1908 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain; PASTA domain. | 0.577 |
Bcav_0026 | Bcav_2049 | PFAM: Protein kinase domain; PASTA domain. | Fmu (Sun) domain protein; PFAM: NusB family; NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.535 |
Bcav_0026 | Bcav_2102 | PFAM: Protein kinase domain; PASTA domain. | PFAM: FHA domain. | 0.996 |
Bcav_0026 | Bcav_2211 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein kinase domain. | 0.643 |
Bcav_0026 | Bcav_4033 | PFAM: Protein kinase domain; PASTA domain. | PFAM: Protein phosphatase 2C. | 0.956 |
Bcav_0027 | Bcav_0026 | PFAM: Protein kinase domain. | PFAM: Protein kinase domain; PASTA domain. | 0.915 |
Bcav_0027 | Bcav_1908 | PFAM: Protein kinase domain. | PFAM: Protein kinase domain; PASTA domain. | 0.619 |
Bcav_0027 | Bcav_2102 | PFAM: Protein kinase domain. | PFAM: FHA domain. | 0.939 |
Bcav_0027 | Bcav_4033 | PFAM: Protein kinase domain. | PFAM: Protein phosphatase 2C. | 0.892 |
Bcav_0797 | Bcav_0026 | PFAM: Protein kinase domain. | PFAM: Protein kinase domain; PASTA domain. | 0.665 |
Bcav_0797 | Bcav_1908 | PFAM: Protein kinase domain. | PFAM: Protein kinase domain; PASTA domain. | 0.644 |
Bcav_0797 | Bcav_2102 | PFAM: Protein kinase domain. | PFAM: FHA domain. | 0.927 |
Bcav_0797 | Bcav_4033 | PFAM: Protein kinase domain. | PFAM: Protein phosphatase 2C. | 0.874 |
Bcav_1629 | Bcav_4033 | PFAM: MerR family regulatory protein. | PFAM: Protein phosphatase 2C. | 0.864 |
Bcav_1757 | Bcav_0026 | PFAM: Protein kinase domain. | PFAM: Protein kinase domain; PASTA domain. | 0.642 |
Bcav_1757 | Bcav_1860 | PFAM: Protein kinase domain. | PFAM: Protein kinase domain. | 0.770 |
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