STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dfer_0911TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: dar:Daro_2636 arsenical-resistance protein ACR3. (366 aa)    
Predicted Functional Partners:
Dfer_0909
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: cyb:CYB_2366 arsenate reductase.
 
  
 0.869
Dfer_0910
PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC3769 phosphinothricin N- acetyltransferase.
  
    0.784
Dfer_0908
KEGG: lbf:LBF_2772 hypothetical protein.
       0.725
Dfer_0907
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: chu:CHU_1513 ArsR family transcriptional regulator.
  
  
 0.615
Dfer_0848
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: cyb:CYB_2366 arsenate reductase.
 
  
 0.445
Dfer_1929
PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: lbf:LBF_2771 protein-tyrosine-phosphatase.
 
  
 0.440
Your Current Organism:
Dyadobacter fermentans
NCBI taxonomy Id: 471854
Other names: D. fermentans DSM 18053, Dyadobacter fermentans DSM 18053, Dyadobacter fermentans str. DSM 18053, Dyadobacter fermentans strain DSM 18053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.