STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_0126PFAM: Aldose 1-epimerase; KEGG: tbd:Tbd_2730 dihydroxyacid dehydratase; Belongs to the glucose-6-phosphate 1-epimerase family. (288 aa)    
Predicted Functional Partners:
Jden_0258
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
     
 0.912
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: sat:SYN_02950 glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.909
ilvD-2
KEGG: mfa:Mfla_0340 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
      0.904
Jden_0238
PFAM: ROK family protein; KEGG: sfu:Sfum_1953 ROK family protein.
     
  0.900
Jden_0939
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: kpe:KPK_1590 PTS system, beta-glucoside- specific EIIBCA component.
     
  0.900
Jden_1441
TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: mxa:MXAN_6497 glucokinase.
     
  0.900
Jden_1492
PFAM: ROK family protein; KEGG: asa:ASA_3376 ROK family protein.
     
  0.900
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
  0.830
Jden_1585
PFAM: glucose-6-phosphate dehydrogenase; KEGG: bvi:Bcep1808_0883 glucose-6-phosphate 1- dehydrogenase.
 
  
  0.827
Jden_2209
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: ppr:PBPRB1732 keto-hydroxyglutarate- aldolase/keto-deoxy-phosphogluconate aldolase.
    
  0.813
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.