STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_0456SMART: protein phosphatase 2C domain protein; KEGG: cja:CJA_1646 protein phosphatase. (287 aa)    
Predicted Functional Partners:
Jden_0170
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bsu:BSU15770 protein kinase.
 
 
 0.984
Jden_1432
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bha:BH2504 serine/threonine protein kinase.
 
 
 0.984
Jden_0458
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: sus:Acid_0222 serine/threonine protein kinase.
 
 
 0.983
Jden_0171
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: bcy:Bcer98_2514 protein kinase.
 
 
 0.896
Jden_2062
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; protein of unknown function RIO1; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: afw:Anae109_2094 protein kinase.
 
 
 0.895
Jden_0459
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: sde:Sde_1294 polyhydroxyalkanoate synthesis repressor PhaR.
 
     0.887
Jden_0457
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: ank:AnaeK_0242 Fe-S oxidoreductase.
 
 
 0.850
Jden_1312
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ank:AnaeK_4081 NusB/RsmB/TIM44; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.839
Jden_0173
PFAM: cell cycle protein; KEGG: gbm:Gbem_0490 cell division protein FtsW; Belongs to the SEDS family.
  
 0.761
Jden_0461
PFAM: protein of unknown function DUF58; KEGG: gur:Gura_0188 hypothetical protein.
 
     0.746
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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