STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_0734PFAM: glycoside hydrolase family 5; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: azc:AZC_1301 endoglucanase. (580 aa)    
Predicted Functional Partners:
Jden_0735
PFAM: glycoside hydrolase family 6; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: rso:RS03897 exoglucanase A; Belongs to the glycosyl hydrolase family 6.
 
 
0.971
Jden_0538
PFAM: glycoside hydrolase family 6; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: mxa:MXAN_4837 endoglucanase; Belongs to the glycosyl hydrolase family 6.
 
0.943
Jden_1754
Beta-galactosidase; KEGG: hch:HCH_06907 beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
    
 0.939
Jden_1879
Beta-galactosidase; KEGG: scl:sce4297 Beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
    
 0.939
Jden_0198
PFAM: glycoside hydrolase family 3 domain protein; KEGG: scl:sce2601 Beta-glucosidase.
   
 0.918
Jden_0471
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bur:Bcep18194_C6710 beta-glucosidase.
    
 0.917
Jden_0472
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: pin:Ping_2107 glycoside hydrolase family 3 protein.
    
 0.917
Jden_1770
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: bha:BH1908 glucan 1,4-beta-glucosidase.
    
 0.917
Jden_2534
PFAM: glycoside hydrolase family 3 domain protein; KEGG: mmw:Mmwyl1_0214 glycoside hydrolase family 3 protein.
    
 0.917
Jden_0733
PFAM: glycoside hydrolase family 10; cellulose- binding family II; SMART: glycoside hydrolase family 10; cellulose- binding family II; KEGG: endo-1,4-beta-xylanase; K01181 endo-1,4-beta-xylanase.
 
  
0.898
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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