STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jden_2016PFAM: OmpA/MotB domain protein; KEGG: gsu:GSU3028 chemotaxis MotB protein. (305 aa)    
Predicted Functional Partners:
Jden_2017
PFAM: MotA/TolQ/ExbB proton channel; KEGG: mms:mma_2082 MotA chemotaxis protein.
 
 0.999
Jden_2015
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.974
Jden_2029
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bcz:BCZK1521 flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.974
Jden_2004
CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases.
 
  
 0.973
Jden_2003
PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rce:RC1_1757 purine-binding chemotaxis protein CheW, putative.
 
  
 0.965
Jden_2026
TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: bsu:BSU16220 flagellar motor switch protein G.
 
  
 0.964
Jden_2033
TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: bha:BH3613 flagellar protein FliS.
 
  
 0.964
Jden_2027
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.963
flgK
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: ppd:Ppro_3455 flagellar hook-associated protein FlgK.
 
  
 0.963
Jden_2014
PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: sat:SYN_02837 flagellar motor switch protein.
 
  
 0.958
Your Current Organism:
Jonesia denitrificans
NCBI taxonomy Id: 471856
Other names: J. denitrificans DSM 20603, Jonesia denitrificans DSM 20603, Jonesia denitrificans str. DSM 20603, Jonesia denitrificans strain DSM 20603
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