STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV07006.1DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: ava:Ava_0899 5.1e-57 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K00811; COG: COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Psort location: Cytoplasmic, score: 8.96; Belongs to the DegT/DnrJ/EryC1 family. (380 aa)    
Predicted Functional Partners:
EDV07005.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.859
rfbB
KEGG: bfs:BF3504 5.6e-193 rffG; putative dTDP-glucose 4,6-dehydratase K01710; COG: COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.553
EDV03597.1
Polysaccharide biosynthesis protein; KEGG: fnu:FN1696 9.7e-47 UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase K00100:K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.473
EDV04312.1
Hypothetical protein; KEGG: lsl:LSL_0995 3.0e-91 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase K00100:K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
  
 0.465
EDV07004.1
Hypothetical protein.
       0.448
EDV03554.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 5.9e-79 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases.
  
  
 0.447
EDV03459.1
KEGG: sat:SYN_02683 7.9e-84 UDP-N-acetylglucosamine 2-epimerase K01791; COG: COG0381 UDP-N-acetylglucosamine 2-epimerase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.421
EDV03529.1
KEGG: bth:BT0383 3.9e-178 putative UDP-N-acetylglucosamine 2-epimerase K01791; COG: COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.421
EDV06168.1
Tat pathway signal sequence domain protein; KEGG: ctc:CTC00513 8.2e-26 myo-inositol 2-dehydrogenase K00010; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Periplasmic, score: 9.44.
 
  
 0.411
EDV04748.1
Oxidoreductase, NAD-binding domain protein; KEGG: bme:BMEI0020 1.9e-25 glucose-fructose oxidoreductase precursor K00118; COG: COG0673 Predicted dehydrogenases and related proteins.
 
  
 0.401
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.