STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV07334.1KEGG: cpf:CPF_1221 2.6e-204 lacZ; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase. (1033 aa)    
Predicted Functional Partners:
EDV06360.1
Glycosyl hydrolase family 2, TIM barrel domain protein; KEGG: sde:Sde_2632 4.7e-12 HflK K01195; COG: COG3250 Beta-galactosidase/beta-glucuronidase.
  
  
  0.913
EDV07335.1
Putative alpha,alpha-trehalase; KEGG: eci:UTI89_C3520 8.2e-66 ygjK; hypothetical protein YgjK precursor K03931; COG: COG1626 Neutral trehalase.
 
   
 0.813
xylA
KEGG: bth:BT0793 1.6e-229 xylose isomerase K01805; COG: COG2115 Xylose isomerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the xylose isomerase family.
    
 0.808
EDV05647.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: cpf:CPF_1474 8.2e-94 lacZ; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.751
EDV03864.1
Hypothetical protein; KEGG: xcv:XCV4356 2.5e-207 bga2; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 
0.748
EDV06248.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: sal:Sala_1017 3.8e-84 beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.742
EDV04008.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: xcv:XCV4356 2.7e-147 bga2; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 
0.740
EDV07304.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: sme:SMb21655 5.4e-57 lacZ1; probable beta-galactosidase protein K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.731
EDV03909.1
Alpha-galactosidase; KEGG: bfr:BF0550 9.5e-159 alpha-galactosidase K07407; COG: COG3345 Alpha-galactosidase.
 
 
 0.730
EDV04060.1
Alpha-galactosidase; KEGG: bfr:BF0287 0. alpha-galactosidase K07407; COG: COG3345 Alpha-galactosidase.
 
 
 0.719
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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