STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04091.1Hypothetical protein. (401 aa)    
Predicted Functional Partners:
EDV07676.1
COG: COG3746 Phosphate-selective porin.
  
     0.759
EDV05048.1
Hypothetical protein; COG: NOG26080 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.644
EDV07701.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.623
EDV07714.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.616
EDV05508.1
SusD family protein; COG: NOG32594 non supervised orthologous group.
 
     0.583
EDV07708.1
Hypothetical protein.
 
     0.578
EDV05337.1
Hypothetical protein; COG: NOG06100 non supervised orthologous group.
 
     0.543
EDV03026.1
Hypothetical protein.
  
     0.540
EDV03024.1
Hypothetical protein; COG: NOG23366 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.530
EDV07713.1
KEGG: hpa:HPAG1_1147 1.4e-47 ABC-transporter, ATP-binding domain K01509; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.526
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.