STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04177.1Hypothetical protein; COG: NOG30259 non supervised orthologous group. (110 aa)    
Predicted Functional Partners:
EDV04178.1
Hypothetical protein; COG: NOG32387 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.50.
 
     0.950
traG-4
Conjugation system ATPase, TraG family; COG: COG3451 Type IV secretory pathway, VirB4 components.
 
     0.923
EDV04175.1
Hypothetical protein; COG: NOG09946 non supervised orthologous group.
 
     0.920
traJ-3
Conjugative transposon TraJ protein; COG: NOG23367 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.911
traK-4
Conjugative transposon TraK protein; COG: NOG25480 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
 
     0.904
traM-4
Conjugative transposon TraM protein; COG: NOG09945 non supervised orthologous group.
 
     0.889
traN-4
Conjugative transposon TraN protein; COG: NOG26275 non supervised orthologous group.
 
     0.881
EDV04168.1
Hypothetical protein; COG: NOG28378 non supervised orthologous group.
 
     0.810
EDV07236.1
Conjugative transposon protein TraE; COG: NOG32387 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.50.
 
     0.781
EDV03003.1
Hypothetical protein; COG: NOG32387 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.50.
 
     0.781
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.