STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04193.1Integrase core domain protein; COG: COG4584 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.96. (526 aa)    
Predicted Functional Partners:
EDV04192.1
IstB-like ATP-binding protein; KEGG: wol:WD0317 0.0031 lon; ATP-dependent protease La K01338; COG: COG1484 DNA replication protein.
 
  
 0.951
EDV03299.1
IstB-like ATP-binding protein; KEGG: wol:WD0317 0.0031 lon; ATP-dependent protease La K01338; COG: COG1484 DNA replication protein.
 
  
 0.796
EDV03474.1
IstB-like ATP-binding protein; KEGG: wol:WD0317 0.0031 lon; ATP-dependent protease La K01338; COG: COG1484 DNA replication protein.
 
  
 0.796
EDV04285.1
IstB-like ATP-binding protein; KEGG: wol:WD0317 0.0031 lon; ATP-dependent protease La K01338; COG: COG1484 DNA replication protein.
 
  
 0.796
EDV05581.1
IstB-like ATP-binding protein; KEGG: wol:WD0317 0.0031 lon; ATP-dependent protease La K01338; COG: COG1484 DNA replication protein.
 
  
 0.796
EDV04191.1
Hypothetical protein.
       0.497
EDV04190.1
Hypothetical protein.
       0.490
EDV04194.1
Hypothetical protein; COG: COG3666 Transposase and inactivated derivatives.
       0.403
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.