STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FkpGHMP kinase, N-terminal domain protein; KEGG: tcr:508379.10 3.4e-48 fucose kinase K05305; COG: COG2605 Predicted kinase related to galactokinase and mevalonate kinase; Psort location: CytoplasmicMembrane, score: 9.82. (944 aa)    
Predicted Functional Partners:
EDV03554.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 5.9e-79 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases.
  
  
 0.762
hisB
KEGG: bth:BT0203 1.6e-181 hisB; histidinol-phosphatase / imidazoleglycerol-phosphate dehydratase K01089:K01693; COG: COG0131 Imidazoleglycerol-phosphate dehydratase; Psort location: Cytoplasmic, score: 8.96; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
  
  
 0.685
EDV05031.1
Hypothetical protein; COG: NOG25960 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
 
     0.666
EDV02941.1
SusD family protein; COG: NOG26547 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
  
     0.659
XseB
Hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.644
EDV04967.1
Hypothetical protein; COG: NOG25792 non supervised orthologous group.
  
     0.641
EDV05447.1
Hypothetical protein; COG: NOG19105 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.593
EDV05124.1
Hypothetical protein; COG: NOG26638 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
  
     0.589
EDV03340.1
Hypothetical protein; COG: NOG33517 non supervised orthologous group.
  
     0.581
EDV05929.1
Hypothetical protein; KEGG: pcu:pc0570 0.0048 nuoL, nuo12; putative NADH-ubiquinone oxidoreductase chain L K00341; COG: NOG26779 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.577
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.