STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV04346.1Hypothetical protein; KEGG: vfi:VFA0114 1.4e-29 methyltransferase K00599; COG: NOG10855 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96. (257 aa)    
Predicted Functional Partners:
EDV04345.1
Hypothetical protein.
       0.773
EDV04344.1
Hypothetical protein; KEGG: bcz:BCZK3491 2.9e-10 possible esterase; COG: COG2819 Predicted hydrolase of the alpha/beta superfamily.
 
     0.659
EDV04348.1
Hypothetical protein; KEGG: bth:BT2359 3.7e-70 formamidopyrimidine-DNA glycosylase K01248; COG: COG0266 Formamidopyrimidine-DNA glycosylase; Belongs to the FPG family.
 
   
 0.595
EDV04347.1
Hypothetical protein.
       0.527
EDV04343.1
Hypothetical protein.
       0.475
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.