STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05348.1Site-specific recombinase, phage integrase family; COG: NOG27388 non supervised orthologous group; Belongs to the 'phage' integrase family. (315 aa)    
Predicted Functional Partners:
EDV03302.1
Site-specific recombinase, phage integrase family; COG: NOG26667 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.678
EDV04143.1
Site-specific recombinase, phage integrase family; COG: NOG26667 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.671
EDV05142.1
Phage integrase SAM-like domain protein; COG: COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.627
EDV04270.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.615
EDV06606.1
Hypothetical protein.
 
   
 0.597
EDV04616.1
Site-specific recombinase, phage integrase family; COG: NOG11640 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.594
EDV05347.1
Hypothetical protein.
       0.563
EDV05518.1
Site-specific recombinase, phage integrase family; COG: COG4974 Site-specific recombinase XerD; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
  
     0.563
EDV04847.1
Hypothetical protein; COG: NOG29310 non supervised orthologous group.
  
   
 0.525
EDV06235.1
Hypothetical protein; COG: NOG28779 non supervised orthologous group.
  
   
 0.512
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.