Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LO55_1157 | LO55_3128 | LO55_1157 | LO55_3128 | Aminotransferase class-V family protein. | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | 0.999 |
| LO55_1157 | LO55_4061 | LO55_1157 | LO55_4061 | Aminotransferase class-V family protein. | Rhodanese-like domain protein. | 0.989 |
| LO55_1157 | LO55_5167 | LO55_1157 | LO55_5167 | Aminotransferase class-V family protein. | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.871 |
| LO55_1157 | rplK | LO55_1157 | LO55_1176 | Aminotransferase class-V family protein. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.788 |
| LO55_1157 | rplQ | LO55_1157 | LO55_1065 | Aminotransferase class-V family protein. | L17: ribosomal protein L17. | 0.793 |
| LO55_1157 | rplU | LO55_1157 | LO55_357 | Aminotransferase class-V family protein. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.801 |
| LO55_1157 | rpsQ | LO55_1157 | LO55_1083 | Aminotransferase class-V family protein. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.965 |
| LO55_1157 | sodB | LO55_1157 | LO55_4565 | Aminotransferase class-V family protein. | Superoxide dismutase [Mn/Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.871 |
| LO55_1157 | ybeY | LO55_1157 | LO55_2115 | Aminotransferase class-V family protein. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.975 |
| LO55_2116 | ybeY | LO55_2116 | LO55_2115 | phoH-like family protein. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.988 |
| LO55_3128 | LO55_1157 | LO55_3128 | LO55_1157 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Aminotransferase class-V family protein. | 0.999 |
| LO55_3128 | LO55_4061 | LO55_3128 | LO55_4061 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Rhodanese-like domain protein. | 0.993 |
| LO55_3128 | LO55_5167 | LO55_3128 | LO55_5167 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Iron/manganese superoxide dismutase, alpha-hairpin domain protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.878 |
| LO55_3128 | rplK | LO55_3128 | LO55_1176 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
| LO55_3128 | rplQ | LO55_3128 | LO55_1065 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | L17: ribosomal protein L17. | 0.999 |
| LO55_3128 | rplU | LO55_3128 | LO55_357 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
| LO55_3128 | rpsQ | LO55_3128 | LO55_1083 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.984 |
| LO55_3128 | sodB | LO55_3128 | LO55_4565 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Superoxide dismutase [Mn/Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.878 |
| LO55_3128 | ybeY | LO55_3128 | LO55_2115 | Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. | Putative rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.980 |
| LO55_4061 | LO55_1157 | LO55_4061 | LO55_1157 | Rhodanese-like domain protein. | Aminotransferase class-V family protein. | 0.989 |
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