STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900070355_02167Unannotated protein. (502 aa)    
Predicted Functional Partners:
GCA_900070355_02175
Unannotated protein.
     
 0.947
GCA_900070355_02166
Unannotated protein.
    
  0.945
GCA_900070355_02603
Unannotated protein.
     
0.895
GCA_900070355_01154
Unannotated protein.
     
 0.889
GCA_900070355_01499
Unannotated protein.
     
 0.889
GCA_900070355_02331
Unannotated protein.
     
 0.863
GCA_900070355_00946
Unannotated protein.
     
 0.848
GCA_900070355_02602
Unannotated protein.
     
 0.847
GCA_900070355_01927
Unannotated protein.
     
 0.844
GCA_900070355_00764
Unannotated protein.
     
 0.790
Your Current Organism:
Devriesea agamarum
NCBI taxonomy Id: 472569
Other names: CCUG 55056, D. agamarum, Devriesea agamarum Martel et al. 2008, JCM 16028, LMG 24257, LMG:24257, strain IMP2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.