STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000004466Xeroderma pigmentosum, complementation group C. (870 aa)    
Predicted Functional Partners:
ENSNMLP00000040055
General transcription factor IIH, polypeptide 1.
    
 0.993
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.991
ENSNMLP00000013326
RAD23 homolog A, nucleotide excision repair protein a.
   
 0.991
ENSNMLP00000026015
Excision repair cross-complementation group 2.
    
 0.979
ENSNMLP00000003164
annotation not available
    
 0.972
ENSNMLP00000005891
Centrin 4.
    
 0.972
ENSNMLP00000018775
Centrin, EF-hand protein, 2.
    
 0.972
ENSNMLP00000028878
General transcription factor IIH, polypeptide 2.
    
 0.968
ENSNMLP00000016038
Centrin 3.
    
 0.966
ENSNMLP00000037005
Xeroderma pigmentosum, complementation group A.
    
 0.963
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.