STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000036963CCR4-NOT transcription complex, subunit 6b. (559 aa)    
Predicted Functional Partners:
ENSNMLP00000023568
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.985
ENSNMLP00000010901
CCR4-NOT transcription complex, subunit 7.
    
 0.983
ENSNMLP00000024210
CCR4-NOT transcription complex, subunit 8.
    
 0.982
ENSNMLP00000027127
CCR4-NOT transcription complex, subunit 3b.
    
 0.978
ENSNMLP00000015207
CCR4-NOT transcription complex, subunit 4a.
    
 0.968
ENSNMLP00000003380
CCR4-NOT transcription complex, subunit 11.
    
 0.962
ENSNMLP00000008691
CCR4-NOT transcription complex, subunit 10.
    
 0.960
ENSNMLP00000030979
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.960
ENSNMLP00000003020
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
  0.955
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 0.946
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.