STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPS7BCOP9 signalosome subunit 7B. (268 aa)    
Predicted Functional Partners:
ENSNMLP00000003519
G protein pathway suppressor 1.
   
 0.998
ENSNMLP00000012205
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
 0.998
ENSNMLP00000025249
COP9 signalosome subunit 3.
    
 0.998
ENSNMLP00000013967
COP9 signalosome subunit 2.
    
 0.995
ENSNMLP00000032653
COP9 signalosome subunit 8.
    
 0.995
COPS6
COP9 signalosome subunit 6.
    
 0.995
ENSNMLP00000022138
COP9 signalosome subunit 5.
    
 0.994
ENSNMLP00000022134
Protein phosphatase 1, regulatory subunit 42.
    
 0.990
ENSNMLP00000033246
annotation not available
    
 0.933
ENSNMLP00000033644
NEDD8 ubiquitin like modifier, like.
    
 0.933
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.