STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
A0A2H3DA25Putative ABC transporter; Belongs to the ABC transporter superfamily. (1398 aa)    
Predicted Functional Partners:
A0A2H3DWL1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.617
A0A2H3CTG2
ATP synthase subunit gamma.
   
   0.607
A0A2H3EH17
Electron transfer protein 1.
    
 0.584
A0A2H3DUW2
TAP42-like protein.
    
 0.550
A0A2H3DDL2
Uncharacterized protein.
   
 
  0.497
A0A2H3E9M4
Glycoside hydrolase.
   
 
  0.497
A0A2H3DCJ5
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.494
A0A2H3E9T4
Uncharacterized protein.
    
 
 0.494
A0A2H3E9F5
Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.483
A0A2H3D5F0
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
     
 0.478
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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