A0A2H3DS83 protein (Armillaria gallica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3DS83

Uncharacterized protein. (863 aa)

Predicted Functional Partners:

A0A2H3E0Y1

0.998

A0A2H3EMU5

0.983

A0A2H3D220

0.982

A0A2H3DY15

0.960

A0A2H3EMM9

0.947

A0A2H3E3Q6

0.946

A0A2H3CF97

0.932

A0A2H3DNH2

0.932

A0A2H3DM28

0.924

A0A2H3EKM8

0.920

Your Current Organism:

Armillaria gallica

NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3CF97	A0A2H3D220	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	PPIase cyclophilin-type domain-containing protein.	0.571
A0A2H3CF97	A0A2H3DNH2	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.928
A0A2H3CF97	A0A2H3DS83	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.932
A0A2H3CF97	A0A2H3DY15	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	Activator of Hsp90 ATPase.	0.725
A0A2H3CF97	A0A2H3E0Y1	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	SGS-domain-containing protein.	0.490
A0A2H3CF97	A0A2H3E3Q6	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.411
A0A2H3CF97	A0A2H3EKM8	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.541
A0A2H3CF97	A0A2H3EMM9	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	HSP20-like chaperone.	0.799
A0A2H3CF97	A0A2H3EMU5	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	TPR-like protein.	0.975
A0A2H3D220	A0A2H3CF97	PPIase cyclophilin-type domain-containing protein.	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	0.571
A0A2H3D220	A0A2H3DNH2	PPIase cyclophilin-type domain-containing protein.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.571
A0A2H3D220	A0A2H3DS83	PPIase cyclophilin-type domain-containing protein.	Uncharacterized protein.	0.982
A0A2H3D220	A0A2H3DY15	PPIase cyclophilin-type domain-containing protein.	Activator of Hsp90 ATPase.	0.981
A0A2H3D220	A0A2H3E0Y1	PPIase cyclophilin-type domain-containing protein.	SGS-domain-containing protein.	0.686
A0A2H3D220	A0A2H3E3Q6	PPIase cyclophilin-type domain-containing protein.	Uncharacterized protein.	0.634
A0A2H3D220	A0A2H3EMM9	PPIase cyclophilin-type domain-containing protein.	HSP20-like chaperone.	0.983
A0A2H3D220	A0A2H3EMU5	PPIase cyclophilin-type domain-containing protein.	TPR-like protein.	0.956
A0A2H3DM28	A0A2H3DS83	Rap-GAP domain-containing protein.	Uncharacterized protein.	0.924
A0A2H3DNH2	A0A2H3CF97	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Actin-like ATPase domain-containing protein; Belongs to the heat shock protein 70 family.	0.928
A0A2H3DNH2	A0A2H3D220	Heat shock protein 70; Belongs to the heat shock protein 70 family.	PPIase cyclophilin-type domain-containing protein.	0.571