STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_0507KEGG: rme:Rmet_5467 hypothetical protein. (321 aa)    
Predicted Functional Partners:
Daud_0505
KEGG: eli:ELI_07890 predicted ATP-dependent endonuclease, OLD family protein.
       0.762
Daud_0506
PFAM: protein of unknown function DUF1156; KEGG: ter:Tery_4275 protein of unknown function DUF1156.
       0.762
Daud_0503
PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: swo:Swol_2010 hypothetical protein.
       0.756
Daud_0504
KEGG: psb:Psyr_0099 hypothetical protein.
       0.756
Daud_0508
KEGG: swo:Swol_2007 ATPase (AAA+ superfamily)-like protein.
       0.732
Daud_0501
KEGG: sde:Sde_2749 hypothetical protein.
       0.410
Daud_0502
KEGG: sde:Sde_2749 hypothetical protein.
       0.410
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.