STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_0851KEGG: cya:CYA_1097 trehalose synthase/putative maltokinase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain. (1108 aa)    
Predicted Functional Partners:
Daud_0866
KEGG: mta:Moth_1850 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77.
 
 0.989
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 0.983
Daud_1656
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.981
Daud_1655
PFAM: glycosyl transferase, family 20; KEGG: mta:Moth_1367 alpha,alpha-trehalose-phosphate synthase (UDP-forming).
 
 
 0.976
Daud_1047
PFAM: glycoside hydrolase 15-related; KEGG: mbu:Mbur_0526 glycoside hydrolase 15-related.
 
  
 0.970
Daud_1162
PFAM: amino acid permease-associated region; KEGG: mta:Moth_0737 amino acid permease-associated region.
   
 0.956
Daud_0015
Alpha-glucosidase; PFAM: glycoside hydrolase, family 31; KEGG: cyb:CYB_1375 glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.955
Daud_1045
PFAM: glycoside hydrolase, family 57; KEGG: mta:Moth_1915 glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family.
     
 0.933
Daud_0849
PFAM: glycoside hydrolase, family 57; KEGG: mta:Moth_1810 glycoside hydrolase, family 57.
 
   
 0.869
Daud_0575
4-alpha-glucanotransferase-like protein; KEGG: mta:Moth_1850 4-alpha-glucanotransferase.
 
  
 0.794
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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