STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgAGlycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (500 aa)    
Predicted Functional Partners:
Daud_0851
KEGG: cya:CYA_1097 trehalose synthase/putative maltokinase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
  
 0.983
Daud_0866
KEGG: mta:Moth_1850 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77.
 
 
 0.970
Daud_2043
PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: bld:BLi04290 putative alcohol dehydrogenase/acetaldehyde dehydrogenase; RBL03615; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.967
Daud_0268
PFAM: glycosyl transferase, group 1; protein of unknown function UPF0131; KEGG: dde:Dde_0881 hypothetical protein.
    
 0.915
Daud_1045
PFAM: glycoside hydrolase, family 57; KEGG: mta:Moth_1915 glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family.
  
 
 0.913
Daud_1039
PFAM: glycosyl transferase, group 1; KEGG: mta:Moth_1934 glycosyl transferase, group 1.
     
 0.903
Daud_1323
TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: tma:TM0896 galactose-1-phosphate uridylyltransferase.
  
  
 0.822
Daud_1040
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: mta:Moth_1925 nucleotidyl transferase.
  
 
 0.818
Daud_0862
PFAM: glycosyl transferase, group 1; KEGG: swo:Swol_1900 hypothetical protein.
 
    
 0.739
Daud_0591
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: chy:CHY_1200 PrkA protein.
   
    0.649
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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