STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_1661KEGG: lpn:lpg1661 hypothetical protein. (346 aa)    
Predicted Functional Partners:
Daud_0869
Hypothetical protein; KEGG: bfs:BF1207 possible phosphodiesterase/nucleotide pyrophosphatase-like protein.
  
     0.740
Daud_0449
KEGG: cyb:CYB_2503 hypothetical protein.
  
     0.683
Daud_0676
KEGG: sat:SYN_02215 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
     0.683
Daud_1402
KEGG: mbo:Mb0630c hypothetical protein.
  
     0.608
Daud_1780
PFAM: protein of unknown function DUF115; KEGG: mta:Moth_0762 protein of unknown function DUF115.
  
     0.567
Daud_1937
PFAM: Spore germination protein; KEGG: sth:STH2453 spore germination protein.
  
     0.561
Daud_0283
KEGG: cac:CAC0641 hypothetical protein.
  
     0.530
Daud_1971
KEGG: gvi:glr2085 hypothetical protein.
  
     0.518
Daud_0828
PFAM: protein of unknown function DUF95, transmembrane; KEGG: pho:PH1620 185aa long hypothetical protein.
  
     0.498
Daud_1662
KEGG: gka:GK3326 capsular polysaccharide biosynthesis protein.
       0.493
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.