STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AKY9Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (318 aa)    
Predicted Functional Partners:
A0A0P1A612
Protein required for biogenesis of the ribosomal 60S subunit.
   
 
 0.998
A0A0P1ALQ8
Fha domain-interacting nucleolar.
   
 
 0.988
A0A0P1AEW0
Nucleolar protein-like/EBNA1-binding protein.
   
 
 0.987
A0A0P1AN32
Low quality protein: ribosomal l1 domain-containing protein 1-like.
   
   0.978
A0A0P1B5V0
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.978
A0A0N7L4G5
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.973
A0A0N7L5R8
Ribosomal protein l7.
   
 
 0.971
A0A0P1B2B1
Ribosome biogenesis protein nsa2.
   
 
 0.965
A0A0P1B692
Ribosomal l24 domain containing 1.
   
 
 0.951
A0A0N7L812
60s ribosomal protein l5.
   
 
 0.947
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.