STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1B4Z0Rna polymerase-associated protein rtf1 homolog. (756 aa)    
Predicted Functional Partners:
A0A0P1AAI0
RNA polymerase II assessory factor Cdc73p.
   
 0.994
A0A0P1B296
Camk protein kinase.
   
 0.994
A0A0P1B3I0
Putative RNA polymerase II regulator.
   
 0.994
A0A0P1B4U7
TPR-containing nuclear phosphoprotein that regulates K( ) uptake.
   
 0.994
A0A0P1AN61
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 0.987
A0A0N7L4C5
Fact complex subunit.
   
 0.955
A0A0P1A442
Transcription elongation factor spt6.
   
 
 0.951
A0A0P1AJY4
Transcription elongation factor spt4.
    
 
 0.949
A0A0P1B0V8
Dna-directed rna polymerase ii subunit rpb3-a-like.
    
 
 0.934
A0A0P1B258
Dna-directed rna polymerase ii subunit rpb4-like.
   
   0.926
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.