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PITG_00109 protein (Phytophthora infestans) - STRING interaction network
"PITG_00109" - DEAD/DEAH box RNA helicase, putative in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00109DEAD/DEAH box RNA helicase, putative (518 aa)    
Predicted Functional Partners:
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
  0.937
PITG_18755
SDA1 family protein (594 aa)
     
        0.930
PITG_07311
DEAD/DEAH box RNA helicase, putative (709 aa)
   
 
0.894
PITG_02536
U3 small nucleolar RNA-associated protein 18 (461 aa)
     
 
  0.887
PITG_00663
rRNA methyltransferase, putative; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (881 aa)
     
   
  0.885
PITG_03955
U3 small nucleolar RNA-associated protein, putative (514 aa)
     
 
  0.884
PITG_11796
Digestive organ expansion factor (810 aa)
     
 
  0.882
PITG_03876
U3 small nucleolar RNA-interacting protein, putative (471 aa)
     
 
  0.876
PITG_02839
DEAD/DEAH box RNA helicase, putative (479 aa)
   
 
0.870
PITG_00410
Bystin (422 aa)
     
  0.870
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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